Name: Magda Julkowska
Type: User
Company: Boyce Thompson Institute
Bio: I am a scientist working on stress induced changes in plant architecture, coding in R/python, interested in democratizing phenotyping and statistical pipelines.
Twitter: mmjulkowska
Location: Ithaca, NY, United States
Blog: https://btiscience.org/magda-julkowska
Magda Julkowska's Projects
Template for writing your own contributing guide
Analyzing natural variation in Galapagos tomatoes
roots - forward genetics - big data analysis - r coding
Glittery data analysis and multi-variate analysis for all kinds of beautiful, big and small data sets. But remember - rubbish in = rubbish out!
All things related to BTI's Highthroughput Phenotyping Facility
repository containing the codes related to the screen of 220 S. pimpinellifolium accessions and their responses to salt stress focusing on the root architecture
Integrative insight into natural variation of S.pimpinellifolium in response to salt stress
This is an example notebook illustrating the analysis pipeline for the processing of your data from High-throughput phenotyping platform (PSI.cz)
Shiny app to quickly process phenotyping data from PhenoRig or PhenoCage
Interactive exploration of the natural variation in Arabidopsis Root System Architecture under salt stress
Simultaneous GWAS visualization from many different experiments
The app that makes my life a bit simpler plotting the expression of genes of interest from RNAseq experiment