mljaniczek Goto Github PK

asashortcourse-multiomics

Short Course on Multi-Omics

atac-seq

Pipeline to process ATAC-seq data (BAMS)

autoflo

Scripts and functions for an automated flow cytometry gating workflow

bicbin

Biclustering sparse binary data in parallel

book-club

Supporting materials for stats/coding book-club

brcaclustersub

Using clustering algorithms on multi-modal genomic and epigenomic data to refine breast cancer subgroups

bstfun

clusterednonsense

Project to analyze somatic nonsense mutations across multiple cancer types

cmprsk2

Extensions for the cmprsk package.

collaborama

comets-diffnet-prez

Landscape of differential network analysis methods and software

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

densityfinder

Package to implement algorithm to detect nonsense mutation enrichment patterns

diff_net_python

Scripts to perform differential network analysis in python

education.rstudio.com

ezfun

R package to generate tables for clinical projects for use in word R Markdown files

fall_data_challenge_2022_help

Some scripts to help students work with data from fall data challenge 2022!

fluent

What the Package Does (One Line, Title Case)

funnum

Hodgepodge collection of modified functions from other packages, customized for use in my projects.

gnomer

Package to wrangle and visualize genomic data in R

gtsummary

gtsummary-presentation-rladies

Slides for my RLadies NYC Presentation

hierarchical-simulation

Simulation study for multi-level hierarchical data predicting a binary outcome using Frequentist & Bayesian models

inference-intuition

Collection of notes and simulations to better understand statistical inference

jgl-tutorial

Tutorial for using joint graphical lasso in R

lasso-tutorial

some helpful code for lasso analysis and visualization

mljaniczek.github.io

Margaret Janiczek's Website

nebula

R package implementing Network-based non-parametric Bayes algorithm for subtype analysis

nonsensedense

What the Package Does (One Line, Title Case)

opencyto

A package that provides data analysis pipeline for flow cytometry.