mjohnson11 Goto Github PK

bbq

Visualization for bbq yeast QTL-mapping project

csc306

Class materials for CSC306

elephant

A turtle-inspired drawing board for jupyter / google colab based on svg/d3

example-branches

Sample example-branches repo for GitHub Training classes

figure80

an interactive science communication website

figure80_interaction_action_binder

Jump start on analyzing data from Johnson 2019 paper

fitness_effect_database

invite

an invitation

jbrowse2-custom-feature-renderer-basic

Trying to make the most basic and understandable custom feature renderer for jbrowse2

ltee_browser

A data browser for metagenomic and functional genomic data from the long term E. coli evolution experiment

miloswebsite

Milo's website 21st century center for internet things on the web

plt_code

2022 version of PLT data processing scripts

plt_pipeline

Scripts used for processing data from the pleiotropy lineage tracking project

plt_scripts

scripts for the Pleiotropy Lineage Tracking Project

reference_refinement

Just a few scripts to update a genome reference for resequencing projects

samplot

Plot structural variant signals from many BAMs and CRAMs

shchurch.github.io

somemusicideas

music notation experimenting

tnseq_pipeline

vlte_browser

web browser for evolution experiment data

vlte_pipelines

Pipelines for fitness assay, sequencing, etc. analysis of the VLTE ("very" long term evolution experiment (yeast))

vtn_pipeline

Scripts for analyzing TnSeq data from a project mutagenizing yeast from an evolution experiment

vtn_viz

Rough visualization of VTn data

website_work

working copy of my website and web projects

whoockle

wowohwowtable

A recursive interactive plotting space for exploring your own data

yoda_viz

Visualization for yoda project