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mitradarja Goto Github PK

followers: 17.0 following: 0.0 repos: 25.0 gists: 0.0

Type: User

Company: Max Planck Institute for Molecular Genetics

Bio: PhD Student, interested in probabilistic data structures, compression strategies, fun algorithms and applications using bioinformatics to aid medical research

Location: Berlin

mitradarja's Projects

app-template icon app-template

This is a template for app developers with SeqAn3. You can easily clone this repository and modify the existing code to your needs. It provides the elementary set-up for all SeqAn3 applications.

cobs icon cobs

COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)

minimizer_ibf icon minimizer_ibf

Contains reference data and code for computing minimizers and the IBF

needle icon needle

Fast and efficient searches of NGS data

pathint icon pathint

Code to accompany our paper "Continual Learning Through Synaptic Intelligence" ICML 2017

raptor icon raptor

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

seqan icon seqan

SeqAn's official repository.

seqan3 icon seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

squeakr icon squeakr

Squeakr: An Exact and Approximate k -mer Counting System

travis-yaml icon travis-yaml

parses, normalizes, validates and serializes your .travis.yml

usage_plots icon usage_plots

Scripts for generating plots about the usage of OpenMS

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