Type: User
Company: Max Planck Institute for Molecular Genetics
Bio: PhD Student, interested in probabilistic data structures, compression strategies, fun algorithms and applications using bioinformatics to aid medical research
Location: Berlin
mitradarja's Projects
This is a template for app developers with SeqAn3. You can easily clone this repository and modify the existing code to your needs. It provides the elementary set-up for all SeqAn3 applications.
Conda recipes for the bioconda channel.
COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)
Just a simple test
Work in progress for the HIBF.
Contains reference data and code for computing minimizers and the IBF
Fast and efficient searches of NGS data
Code to accompany our paper "Continual Learning Through Synaptic Intelligence" ICML 2017
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
SeqAn's official repository.
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
THE argument parser for bio-c++ tools.
Squeakr: An Exact and Approximate k -mer Counting System
parses, normalizes, validates and serializes your .travis.yml
Scripts for generating plots about the usage of OpenMS