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Mohammad Mirkazemi's Projects

bartseq icon bartseq

Software required for Bart-Seq technology – a cheap technology to analyze (single) cells using forward and reverse barcoding for target genes

basic icon basic

A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images

besonconworker icon besonconworker

A python class providing a set of methods to run several jobs on Besoncon web service

cellprofiler icon cellprofiler

An open-source application for biological image analysis

decamsim icon decamsim

A python package providing tools to simulate DECam data.

photometryml icon photometryml

A python package providing tools to handle photometric data and implementing machine learning techniques.

pypmc icon pypmc

Clustering with variational Bayes and population Monte Carlo

scanpy icon scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

tensorflow icon tensorflow

Computation using data flow graphs for scalable machine learning

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