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alphago

A replication of DeepMind's 2016 Nature publication, "Mastering the game of Go with deep neural networks and tree search," details of which can be found on their website.

c3

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

edgetunnel

在原版的基础上修改了显示 VLESS 配置信息转换为订阅内容。使用该脚本，你可以方便地将 VLESS 配置信息使用在线配置转换到 Clash 或 Singbox 等工具中。

gatk

GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

gatk-protected

GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

genamap

Visual Machine Learning of Genome-Phenome Associations

goagent

https://code.google.com/p/goagent/issues/list

h-popg

H-PoP and H-PoPG: Heuristic Partitioning Algorithms for Single Individual Haplotyping of Polyploids

hapcol

A fast and memory-efficient method for haplotype assembly from long gapless reads.

htslib

C library for high-throughput sequencing data formats

igv

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

lgh

LGH: A Fast and Accurate Algorithm for Single Individual Haplotyping Based on a Two-Locus Linkage Graph

libgd

GD Graphics Library

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

msinrf

Predict CircRNA-Disease Associations Based on Random Walk with Restart, Principal Component Analysis and Random Forest

picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

probhap

Probabilistic single-individual haplotyping

quast

Genome assembly evaluation tool

samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

shadowsocks-android

A Shadowsocks client for Android

shadowsocks-libev

libev port of shadowsocks

shadowsocks-qt5

A cross-platform shadowsocks GUI client

shadowsocks-rss

ShadowsocksR update rss

shadowsocksx-ng

Next Generation of ShadowsocksX

sra-tools

SRA Tools

ssrules

一个 Shadowsocks 规则编辑器（Android）

w2rap-contigger

An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.