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Marc Horlacher's Projects

bend icon bend

Benchmarking DNA Language Models on Biologically Meaningful Tasks

biophi icon biophi

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.

coolbox icon coolbox

Jupyter notebook based genomic data visualization toolkit.

docker-pile icon docker-pile

A collection of dockerized software for Data Science

gin-config icon gin-config

Gin provides a lightweight configuration framework for Python

igrads icon igrads

A Tensorflow 2.x implementation of the explainable AI method 'Integrated Gradients'.

jpegmedian icon jpegmedian

Extracts the background image from a sequence of stationary images (JPEG)

metamotif icon metamotif

Generate consensus sequence motifs from (arbitrary) sequence importance scores.

milatools icon milatools

Tools to connect to and interact with the Mila (and other) clusters

streamfork icon streamfork

A small library for streaming data to a number of connecting clients

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