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mhhennig avatar mhhennig commented on August 24, 2024

Hi, sorry for the delay and that you have problems.
I just tested the whole procedure in a fresh miniconda env, with Python 3.10.9 and numpy and cython installed (conda install numpy cython). This worked fine, with numpy version 1.23.5.

Can you try this and let the setup install all dependencies?

Also, does pip install herdingspikes work, or do you have the same issues?

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b-grimaud avatar b-grimaud commented on August 24, 2024

Hi, I recently found the problem and didn't update this issue, my bad.

It stemmed from setuptools trying to install the latest possible version of dependencies (e.g. pandas 1.5.3) no matter the current Python version.

It was solved by manually installing each dependency in the environment beforehand (from the top of my head : numpy, pandas, h5py and scipy, but I could be wrong) then building from source.

A fresh pip install worked just fine, I just wanted access to the latest version and fix a few deprecation warnings.

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mhhennig avatar mhhennig commented on August 24, 2024

Ok, thanks, closing this.

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