mgnute Goto Github PK

alignmentstatistics

Old java repo from Tandy's lab that operates on an MSA and outputs some key summary statistics to a text file.

astral_gui

lightweight GUI using wxPython that assembles a string to run ASTRAL from the command line.

cairo-win-build

Maintainable package for generating builds of cairo compiled binaries for windows.

fastapytools

Collection of python utilities for handling fasta, fastq and general multiple sequence datasets.

gcm

Graph Clustering Merger

ggplot2_code_generator_gui

A GUI using wxPython that automatically generates code to plot with R and ggplot2

gingr

image_manager

automated management of image data for my brother's research project

laika

Simple Python GNSS processing library

mbl2reg

mgnute.github.io

My personal website

misc_c_utilities

Random routines in C

misc_utilities_and_code

Random Excel Based Templates, VBA Utilities, etc...

parsnp

Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes

pasta

PASTA (Practical Alignment using SATe and Transitivity)

phylostrator

The Phylogeny Illustrator

phyloutils

Collection of small utilities for multiple sequence alignment and phylogenetics

pican_pi

Microbial Biodiversity Data Visualization

sepp

Ensemble of HMM methods (SEPP, TIPP, UPP)

stamps-tutorial

tipp_dev_utils

twitteranalyticswithr

Experimenting with the twittR package and Analytics