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ab3p

Abbreviation definition dection library trained on PubMed abstracts

admet_xgboost

aioner

AIONER

alphafold

Open source code for AlphaFold.

biogpt

biomedr

generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.

biorex

bireg

Transcription regulation studies

caviar

Protein cavity identification and automatic subpocket decomposition

cayman

Cayman is a Jekyll theme for GitHub Pages

chatgpt-paper-reader

This repo offers a simple interface that helps you to read&summerize research papers in pdf format. You can ask some questions after reading. This interface is developed based on openai API and using GPT-3.5-turbo model.

chembl_webresource_client

Official Python client for accessing ChEMBL API

decd

A R package for differential expression analysis and exploratory investigation to complex disease using big data

decomplexdisease

A R package for exploratory investigation to complex disease

deep-molecular-optimization

Molecular optimization by capturing chemist’s intuition using the Seq2Seq with attention and the Transformer

deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

deeppocket

Ligand Binding Site detection using Deep Learning

deeppurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

deepred-bbb

DeePred-BBB is a deep Neural network-based model for prediction of blood brain barrier permeability of compounds using Simplified Molecular Input Line Entry System (SMILES) notation of Compounds.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

devcows.com

Home of the DevCows website

dgraphdta

a novel DTA predition method using graph neural network

dlgn

dockstream

DockStream: A Docking Wrapper to Enhance De Novo Molecular Design

dockstreamcommunity

dotfiles

:wrench: .files, including ~/.macos — sensible hacker defaults for macOS

dragon

[NeurIPS 2022] DRAGON 🐲: Deep Bidirectional Language-Knowledge Graph Pretraining

drl-code-pytorch

Concise pytorch implements of DRL algorithms, including REINFORCE, A2C, DQN, PPO(discrete and continuous), DDPG, TD3, SAC.

drug-discovery-using-gans

Check out the dash visualization at https://dash-drug-explorer.plot.ly/out

drugex

Deep learning toolkit for Drug Design with Pareto-based Multi-Objective optimization in Polypharmacology