melissacline Goto Github PK
Type: User
Company: UC Santa Cruz Genomics Institute
Bio: I am a genomics scientist at UC Santa Cruz. I have been working in clinical cancer genetics and the regulation of alternative splicing.
melissacline's Projects
brca-exchange
Overall management and deployment of the BRCA Exchange web portal and pipeline scripts
browserdata
cagi5-brca-assessment
cgdata
Python API to work with the cgData standard
config
Configuration files
gdcutils
Utilities for accessing data over the GDC API
hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
jul-23-elements-of-style-workflow-creation-maintenance
kids-first-elements-of-style-workflow-creation-maintenance
rasl-analysis
Code for analyzing RASL sequencing data to find alternative splicing events linked with myotonic dystrophy
tcga-gaf-source
Source code for creating and manipulating the TCGA GAF data (version 3.0)
ucsccancer
Python package for cancer code
vr-spec
Extensible specification for representing and uniquely identifying biological sequence variation
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