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Name: Molitor Corentin
Type: User
Bio: Bioinformatics
Name: Molitor Corentin
Type: User
Bio: Bioinformatics
R code to create bar graph of chromosomes and add on them the positions of transcripts/genes
Efficient R programming: a book
From GBS to Linkage Map (using Tassel)
Gene copy number prediction from k-mer frequencies
MOAR (Mummer On Assembly against a Reference)
Script to plot the number of transcripts left after filtering by low expression
Python Script to create a histogram of the sequences lengths in a Fasta file (useful to get the distribution of Pacbio Reads for example)
A tutorial on how to run basic polygenic risk score analysis
Script to run pilon by batches of contigs (to avoid out of memory issues)
Development for SAIGE and SAIGE-GENE(+)
Create genomic databases with SIFT predictions. Input is an organism's genomic DNA (.fa) file and the gene annotation file (.gtf). Output will be a database that can be used with SIFT4G_Annotator.jar to annotate VCF files.
Scripts and files used to perform the de novo assembly of Solanum chilense (LA1972)
Instructions to reproduce the de novo assembly of Solanum sitiens (accession LA1974).
Python script to automatically parse a "Contamination.txt" file from the Sequence Reads Archive (SRA) and correct the assembly FASTA file and annotation GTF file.
R markdown explaining k-mer spectra, and how sequencing errors and heterozygosity are affecting them.
VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a list of tissues / gwas traits of interest to complete the results. You can also use your own customised list of genes. VarGen is capable of annotating the variants to help you identify the most impactful ones.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.