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Name: Maren Büttner
Type: User
Bio: Senior Data Scientist at Calico (South San Francisco), previously Postdoc at DZNE (Bonn) and Helmholtz Munich (Munich)
Twitter: marenbuettner
Location: Burlingame, California
Maren Büttner's Projects
anndata-tutorials
Use cases for anndata.
diverse_r_stuff
This is a collection of functions I wanted to have in R, but did not find them.
kbet
An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.
maren_codes
This is my personal collection of Python code chunks.
muon
muon is a multimodal omics Python framework
palantir
Single cell trajectory detection
pycistopic
pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.
python-gprofiler
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
scanpy-tutorials
Scanpy Tutorials.
scverse.github.io
scverse.org website
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