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mazharotagou's Projects

crispresso2 icon crispresso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

dnmt3a_base_editor_scanning icon dnmt3a_base_editor_scanning

Repository containing code used for next-generation sequencing data analysis in Lue et al. Base editor scanning charts the DNMT3A activity landscape (2022).

men1 icon men1

Computational prediction of the impact of point mutations on MEN1 inhibitor binding.

rnaseq icon rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

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