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conflare

This is the repository for the CONFLARE (CONformal LArge language model REtrieval) Python package.

confusionmatrix_dice_recall_with-cupy

Scikitlearn 'confusion matrix' extraction is very slow for digital pathology images of 30k x 30k pixels. Instead cupy library with matrix multiplication could be used to speed up the calculation.

idc_googlecloud_notebook

Deep-learning Nodule Segmentation using LIDC dataset on Google Cloud Platform (GCP).

idc_googlecloud_notebook_3dclassification

mayo-ai-summit-23-gen_ai

mbti

Multitask Brain Tumor Inpainting with Diffusion Models

midel

ril-workflow

rsna2023_yolov8_workshop

siim_prompter

Uses LLM to detect a specific finding in a collection of reports

soup-gan

xml_annotation_modify_with_python

XML annotation format commonly used Imagescope and modyfying color of annotation for every object could be cumbersome. This script helps to change the color of annotation and could be useful to adapt for other task.

xml_to_binarymask_withpython

This script helps to create binary mask files from XML based on the color of annotation. If you want to change the color of annotation, refer to another code in my repository for XML modification.