matthewlemke Goto Github PK
Type: User
matthewlemke's Projects
2020_february_bash_python
clustvis
ClustVis web tool
crispy-guacamole
deseq2
deseq2-1
dge_workshop_salmon
drake
An R-focused pipeline toolkit for reproducibility and high-performance computing
eht-demo
First M87 EHT Results: Imaging Pipelines
enhancedvolcano
Publication-ready volcano plots with enhanced colouring and labeling
foss2020_practice
gene_ids
Filter Arabidopsis gene names
go_mwu
Rank-based Gene Ontology analysis of gene expression data
goexpress-original
Original repository for Bioconductor package. Now at:
gsva
Gene set variation analysis
heatmapper
interproscan
lions
LIONS is a bioinformatic analysis pipeline which brings together a few pieces of software and some home-brewed scripts to annotate a paired-end RNAseq library to detect TE-intiated transcripts
lyons-lab
ontologizer
An Open Source tool with the purpose of identifying enriched Gene Ontology terms in lists of names of genes or gene products
reproducibility-tutorial
FOSS2020 reproducibility exercise
rnaseq-practice
rockerverse-paper
Scientific paper about everything related to containers and R
salmonte
SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
tdnascan
TDNAscan: A Software to Identify Complete and Truncated T-DNA insertions
topgo
go term analysis in R
topgo-1
Enrichment Analysis for Gene Ontology
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