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Name: Matthias De Smet
Type: User
Company: @CenterForMedicalGeneticsGhent
Location: Ghent, Belgium
Name: Matthias De Smet
Type: User
Company: @CenterForMedicalGeneticsGhent
Location: Ghent, Belgium
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Automated Docker builds for bcbio
Small python (2.7) script which encapsulates mosdepth, bedtools and rtg tools for our benchmarking.
Conda recipes for the bioconda channel.
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
A conda-smithy repository for eido.
elPrep: a high-performance tool for preparing sequence alignment/map files in sequencing pipelines.
Lightweight html5 version of the Integrative Genomics Viewer
Repository of bioinformatics tools for the pipelines module
Social connections powered by Authlib.
MaxEntScan source code, copied from http://genes.mit.edu/burgelab/maxent/Xmaxentscan_scoreseq.html
Docker image with Meinheld managed by Gunicorn for high-performance WSGI (Flask, Django, etc) web applications in Python 3.7 and 3.6 with performance auto-tuning. Optionally with Alpine Linux.
Mulled - Automatized Containerized Software Repository
Testing building mulled containers for multi-requirement tools.
Aggregate results from bioinformatics analyses across many samples into a single report.
Test data for MultiQC. See https://github.com/ewels/MultiQC
A DSL for data-driven computational pipelines
UNDER CONSTRUCTION: Demultiplexing pipeline for Illumina sequencing data
Repository to host tool-specific module files for the Nextflow DSL2 community!
Python package with helper tools for the nf-core community.
A conda-smithy repository for peppy.
A conda-smithy repository for ubiquerg.
Docker image with Uvicorn managed by Gunicorn for high-performance web applications in Python 3.7 and 3.6 with performance auto-tuning. Optionally with Alpine Linux.
create a gemini-compatible database from a VCF
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.