matanhofree Goto Github PK
Name: Matan Hofree
Type: User
Company: Broad Institute
Bio: I am a computational biologist specializing in cancer systems biology.
Twitter: matanhofree
Location: Cambridge, MA; Rehovot, Israel
Name: Matan Hofree
Type: User
Company: Broad Institute
Bio: I am a computational biologist specializing in cancer systems biology.
Twitter: matanhofree
Location: Cambridge, MA; Rehovot, Israel
Best-practice pipelines for fully automated high throughput sequencing analysis
Update RCytoscape to work for Cytoscape 3.0 and higher using CyREST
mutation(barcode) caller for 10x single cell data
Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organized multicellular immune hubs in human colorectal cancer"
Algorithms and code developed as part of the study described in Marjanovic et al.
Matlab interface to Stan, a package for Bayesian inference
Docker image for Microsoft R Open
Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments
R package for analyzing single-cell RNA-seq data
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
Here is the demo
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
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A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
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Data-Driven Documents codes.
China tencent open source team.