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Tobias Wenzel's Projects

biomaker-s-prc icon biomaker-s-prc

Community rebuild and varyation of the "Open" PRC projects as Open Science Hardware

data-extraction-from-crossection-tem-images-of-biophotonic-structures icon data-extraction-from-crossection-tem-images-of-biophotonic-structures

This collection of scripts enables the extraction of shapes and parameters from crossection-TEM images of semi-ordered (2d) surface structures e.g. of biological samples, such as often found in structural colours (biophotonics). Non-surface edges were removed manually. The undulation caused by the shape of underlying cells was removed using a low-order polynomial fit. Pixels of consecutive surface pattern were sorted, scaled and noise filtered, before local extrema were detected.

e-beam_lithography_randomised_lines icon e-beam_lithography_randomised_lines

Script to create randomised lines (gaussian and truncated) stacked to cover large area samples for e-beam lithography (generates con and ccc files). Three exposure times can be set for dual-height structures.

enclosure-rostock-max-v2 icon enclosure-rostock-max-v2

DocuBricks documentation of a 3d-printable and laser-cut enclosure for the Rostock Max 3D printer. See rendered and updated(!) documentation on the DocuBricks repository.

honeypi icon honeypi

Installer for a smart IoT beehive scale based on Raspberry Pi 🐝

igem15-sw icon igem15-sw

Software interfaces, libraries and example code for the reprogrammable microscope system

lumerical-simulations-for-cluster icon lumerical-simulations-for-cluster

Analysis scripts for FDTD simulation results (computed with the software Lumerical) on controlled disorder in rectangular reflection gratings.

lumerical-simulations-pc icon lumerical-simulations-pc

Analysis scripts for FDTD simulation results (computed with the software Lumerical) on controlled disorder in rectangular reflection gratings.

miriam icon miriam

Miriam is an open-source isothermal amplification platform

openmicrofluidics icon openmicrofluidics

Review, test and development of open source hardware approaches to microfluidic research equipment and ultra-high throughput bio-experimentation.

openmicroscopy icon openmicroscopy

Non-comprehensive list of projects and resources related to open microscopy.

plotcyclicvoltammetrydata icon plotcyclicvoltammetrydata

Matlab scripts and functions used to analyse electrochemistry data (cyclic voltammetry) from biophotovoltaic devices.

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