Comments (3)
from quickmerge.
Maybe not . I rerun the second step , delta-filter with -l 20000, and do quickmerge again , it runs successfully and outputs the results . Maybe too many alignments caused the software unable to work .
from quickmerge.
I use the original delta-filter result for quickemerge with parameter -ml 25000 ( at first using -m 10000 ) , and get the result ,too.
from quickmerge.
Related Issues (20)
- Unexpected sequence in merged fasta HOT 2
- quickmerge ( multiple long-read only ) + ( multiple hybrid ) assemblies
- ERROR: mummer and/or mgaps returned non-zero
- Does running iterations of quickmerge on quickmerge output create artifacts? HOT 3
- Quickmerge before or after haplotype purging for high heter rate plant assemblies? HOT 1
- quickmerge: terminate called after throwing an instance of 'std::out_of_range' HOT 6
- Is there any problem to use quickmerge and give in input a previous output of quickmerge?
- Problem with Reference and Query
- Confusion about argument ```-l``` and ```-ml``` HOT 3
- [Mac] Running merge_wrapper.py in conda : No such file or directory: 'nucmer': 'nucmer' HOT 3
- quickmerge aborted HOT 8
- Is there a history of merges not included in anchor_summary.txt? HOT 1
- Output problems HOT 2
- sometimes quick merge does not merge contigs? HOT 3
- terminate called after throwing an instance of 'std::out_of_range' HOT 7
- Quickmerge fails to set its PATH internally HOT 6
- core dump at final step HOT 3
- Aborted (core dumped) quickmerge HOT 5
- Program runs, but doesn't provide correct output HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from quickmerge.