mahmoodlab Goto Github PK

clam

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

conch

A vision-language foundation model for computational pathology - Nature Medicine

cpath_demographics

Demographic bias in misdiagnosis by computational pathology models - Nature Medicine

crane

Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine

hest

HEST: Bringing Spatial Transcriptomics and Histopathology together

hest-website

Jekyll website for HEST-1k

hipt

Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)

histofl

Federated Learning for Computational Pathology - Medical Image Analysis

manta

Multimodal AI for Renal Allograft Biopsy Assessment

maps

Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications

maxim

MArker imputation model for multiple\underlineX IMages

mcat

Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021

mi-zero

Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023

mmp

Multimodal prototyping for cancer survival prediction - ICML 2024

multimodal-cancer-origin-prediction

Deep learning-based multimodal integration of histology and genomics to improves cancer origin prediction

nucleisegmentation

cGAN-based Multi Organ Nuclei Segmentation

panther

Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

patch-gcn

Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

pathomicfusion

Fusing Histology and Genomics via Deep Learning - IEEE TMI

porpoise

Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell

sish

Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering

survpath

Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024

tangle

Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024

toad

AI-based pathology predicts origins for cancers of unknown primary - Nature

tox-foundation-ui

tripath

Analysis of 3D pathology samples using weakly supervised AI - Cell

uni

Towards a general-purpose foundation model for computational pathology - Nature Medicine

varpool

Variance pooling to incorporate ITH in CPath models - MICCAI 2022