madduri Goto Github PK

2018-dcppc-minid-agr

argonne-sdl

benchmarks

ECP-CANDLE Benchmarks

ctp

Clinical Trial Processor

cvdnight2

BD2K CVD workshop night 2

deepcovid

docker-galaxy-stable

:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.

docker-jupyter-notebook

:whale: :microscope: :books: Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy

docker-paraviewweb

:whale: ParaViewWeb running in a docker container. This image can be used to integrate ParaViewWeb into Galaxy

dsde-deep-learning

DSDE Deep Learning Club

galaxy

Data intensive biology for everyone.

galaxy-image-analysis

Galaxy tools for image analysis

galaxykickstart

Ansible playbooks for Galaxy Server deployment

jamia-doe-va-mvp

:closed_book: Unofficial Journal of American Medical Informatics Association (JAMIA) Markdown Journal Article Template

madduri.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

mappertrac

Massively Parallel, Portable, and Reproducible Tractography

meshnet

Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940

minid

BD2K Minimal Viable Identifier Pilot

mrbrains18

Grand Challenge on MR Brain Segmentation at MICCAI 2018 - MISPL

niftynetmodelzoo

This repository hosts NiftyNet networks pre-trained for specific tasks

pdacs

Galaxy fork for PDACS project

personalgenome

Empowering individuals to analyze their personal genomics data using publicly available tools

puppet-galaxy

Root repository for the puppet galaxy project.

python-nexus-client

Python client for interacting with GlobusOnline Nexus service

quicknatv2

Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)

rail

Scalable RNA-seq analysis

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

singularity-freesurfer-gpu

tbi-activ

Repo for ACTIV data

torchxrayvision

TorchXRayVision: A library of chest X-ray datasets and models.