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befi-bats-gui

Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.

convergence-utils-sandbox

Sandbox for genomic convergent evolution detection utils

cutter

A Qt and C++ GUI for radare2 reverse engineering framework

databmstdr

Data sets and additional useful functions for modelling spatio-temporal data

dotplotly-issue-18

Generate an interactive dot plot from mummer or minimap alignments - fixes issue 18

hiv-hadpack

Automatically exported from code.google.com/p/hiv-hadpack

lonelyjoeparker.github.io

Build a Jekyll blog in minutes, without touching the command line.

makeyourownneuralnetwork

Code for the Make Your Own Neural Network book

ml-inference-sandbox

Automatically exported from code.google.com/p/ml-inference-sandbox

msc-phylogenetics-lab

Collection of data and scripts used in a 3-hour phylogenetics introductory lab for the Kew/QMUL MSc in plant-and-fungal-taxonomy-diversity-and-conservation

oddjects-sandbox

Sandbox for odd projects, mainly R / Python and mainly bioinformatics or spatial/policy social data

pi_biolinux_cluster

poretools

a toolkit for working with Oxford nanopore data

qmul-genome-convergence-pipeline

API and binaries for phylogenomic analyses, particularly comparison of input trees/alignments (CONTEXT) and detecting genomic convergence

qmul-msc-bio782p-stats-bioinfo

Labs content for 2017 & 2018 QMUL MSc Bioinformatics BIO782P (Stats & bioinformatics) module

real-time-phylogenomics

A sandbox and development repo for projects in real-time phylogenomics application development

spoon-knife

This repo is for demonstration purposes only.

standard-raxml

teaspoon

A package for sequence analysis of serially-sampled populations