Code Monkey home page Code Monkey logo

mu's Projects

apis-model icon apis-model

Discriminative modeling to support cis-regulation of DNA methylation

bghandbook icon bghandbook

Handbook for Brendel Group students, postdocs, and staff

bwasp icon bwasp

Bisulfite-seq data Workflow Automation Software and Protocols

bwaspr icon bwaspr

R functions and scripts to process output from the BWASP workflow

c-di-gmp icon c-di-gmp

Mapping domain co-occurrence networks with emphasis on c-d-GMP binding domains.

coilmd icon coilmd

MD simulation for a coarse grained DNA model, parallelized by OpenMP

fastled icon fastled

The FastLED library for colored LED animation on Arduino. Please direct questions/requests for help to the FastLED Reddit community: http://fastled.io/r We'd like to use github "issues" just for tracking library bugs / enhancements.

find-by-snp icon find-by-snp

find the best matching individual from population given a vcf file for unknown individual

fmab icon fmab

Fundamental Models and Algorithms in Bioinformatics

gimmemotifs icon gimmemotifs

Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.

i529 icon i529

Machine learning for Bioinformatics Lab module

insole icon insole

A pressure-sensitive insole project

keras icon keras

Theano-based Deep Learning library (convnets, recurrent neural networks, and more).

lammps icon lammps

lammps with harmonic-cosine potentials and other modifications for breakable bonds

methylseq icon methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

rice3k icon rice3k

Workflow for calling variants using data from 3000 Rice Genomes project

rice3k-legacy icon rice3k-legacy

A bunch of stuff I am doing with the 3K rice genomes data (obsolete)

scripts icon scripts

generic scripts that I use for analysis, plotting etc.

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.