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linboqiao's Projects

bratreader icon bratreader

Python code for reading Brat Repositories. Supports saving and reading from XML files for easy acces to annotations.

chapyter icon chapyter

Chapyter: ChatGPT Code Interpreter in Jupyter Notebooks

circuitnet icon circuitnet

CircuitNet: An Open-Source Dataset for Machine Learning Applications in Electronic Design Automation (EDA)

cis-x icon cis-x

Search for activating regulatory variants in the tumor genome

constrained-fscil icon constrained-fscil

PyTorch Implementation of the CVPR'22 Paper "Constrained Few-shot Class-incremental Learning"

controlled-peptide-generation icon controlled-peptide-generation

source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molecular Dynamics"

csmddi icon csmddi

人工智能预测冷启动情景中的多种药物-药物相互作用 https://mp.weixin.qq.com/s/hJ0gSJxRvjFvtOfmyljvCw

dst icon dst

(differentiable) gradient-based optimization on a chemical graph for de novo molecule design/optimization (ICLR 2022)

early-detection icon early-detection

Describing the codes for implementing machine learning algorithms by using FAERS database

eea icon eea

Event Extraction and Analysis

evalset icon evalset

Benchmark suite of test functions suitable for evaluating black-box optimization strategies

exact-scip icon exact-scip

A development version of the numerically exact variant of MIP solver SCIP

fscee icon fscee

few-shot learning for event extraction

gbm360 icon gbm360

Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications

graduated-bcd icon graduated-bcd

graduated BCD for nonconvex nonsmooth problems on shared memory distributed system

grawa icon grawa

GRAWA: Gradient-based Weighted Averaging for Distributed Training of Deep Learning Models

harmonypy icon harmonypy

🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.

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