lhui2010 Goto Github PK

.tmux

🇫🇷 Oh my tmux! My self-contained, pretty & versatile tmux configuration made with ❤️

alpinus

Alpinus: A Genome Metaassembly & Polish Pipeline

anchorwave

sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation

annosmk

annotation base on snakemake

annosnp

Predict the effect of SNPs on genes

bioinformatics-training

Bioinformatics training resources

bundle

buzzo

Wrapped Pipelines

ena-fast-download

Download FASTQ files of reads from the European Nucleotide Archive (ENA)

genomicconsensus

PacBio® variant and consensus caller (Quiver algorithm)

goagent

https://code.google.com/p/goagent/issues/list

hpc

Scripts for managing HPC based on lustre and SGE (ROCKS7)

hyphy

HyPhy: Hypothesis testing using Phylogenies

iterm2-zmodem

在 Mac 下，实现与服务器进行便捷的文件上传和下载操作

jcvi

Python library to facilitate genome assembly, annotation and comparative genomics

lagan

LAGAN: large-scale multiple alignment of genomic DNA

lhui2010.github.io

maize_v4_te_annotation

scripts and intermediate files used to annotate TEs in Jiao et al.

python_crash

python_learn

YIlab Python workshop on August 2020

regexalign

Exact sequence alignment tool

rss

recent scientic publications

shadowsocks-libev

libev port of shadowsocks

sine_scan

an efficient tool to search SINEs in genomic datasets

smartie-sv

calling SVs from Blasr contig level alignments

smrt-analysis

SMRT® Analysis is PacBio's bioinformatics software suite for analyzing single molecule, real-time DNA sequencing data

swot

Identify email addresses or domains names that belong to colleges or universities. Help automate the process of approving or rejecting academic discounts.

synergy

Share one mouse and keyboard between multiple computers on your desk.

tigmint

⛓ Correct misassemblies using linked reads

wgs2ncbi

Toolkit for preparing genomes for submission to NCBI