leahvschaffer Goto Github PK
Name: Leah Schaffer
Type: User
Company: @idekerlab @smith-chem-wisc
Twitter: leahvschaffer
Location: San Diego, CA
Leah Schaffer's Projects
ddot
Toolkit for constructing, analyzing, and visualizing data-driven ontologies
drugcell
A visible neural network model for drug response prediction
flashlfq
Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
gptmd
Use open search results (from Morpheus) to create a database with uncovered candidate PTM annotations
hidef
HiDeF (Hierarchical community Decoding Framework)
informed-proteomics
Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
metamorpheus
Fork of the Morpheus Software
music_muse
mytools
mzidentml
Repository for mzIdentML and the corresponding examples
mzlib
Library for mass spectrometry projects
pcprophet
Framework for systematic discovery of novel complexes and differential analysis of cofractionation MS datasets
prince
R implementation of the PrInCE package for predicting interactomes from co-elution data
proteoformsuite
Analysis, visualization, validation suite for proteoform analysis
proteoformsuitevignettes
Vignettes for Proteoform Suite
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