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Lyndon Coghill's Projects

blot icon blot

Tool to semi-automate incorporating raw branch lengths into subtrees from the opentree of life project.

hpc-intro icon hpc-intro

Lesson materials for an Introduction to High Performance Computing in the tradition of Software Carpentry

ofv icon ofv

ORCID Formatted Vitae

opentree icon opentree

Playground for tools related to the Open Tree of Life resources

phyloboost icon phyloboost

Python pipeline to calculate the phylogenetic information of Genbank.

rbcovarion icon rbcovarion

Scripts setting a basic working example of the Covarion model in RevBayes.

sandbox icon sandbox

Just a sandbox for code snippets and other useful or broken things.

stem icon stem

OSX application to help convert between FASTA and NEXUS files, add NEXUS and MrBayes blocks for data partitioning and phylogenetic analysis.

utilities icon utilities

Small utility applications and scripts to help out in various work flows.

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