laura-budurlean Goto Github PK
Name: Laura Budurlean
Type: User
Bio: Transforming DNA into good stories: Bioinformatics scientist exploring genomics data.🧬👩💻
Name: Laura Budurlean
Type: User
Bio: Transforming DNA into good stories: Bioinformatics scientist exploring genomics data.🧬👩💻
Fisher's tests (with or without) correction for multiple testing on 2x2 contingency tables. Uses a list of genes from two populations to test if any are significantly mutated/disrupted by SVs in one population vs another. Specifically set up to test for SVs affecting genes.
GATK WGS workflow
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
A pipeline utilizing PCA on 1000 genomes and WGS data from your own samples to determine or validate ancestry of an individual.
A pipeline to analyze and visualize RNA sequencing data. Includes PCA, heatmap, differential gene expression, and enrichment analysis. with DESeq2
Useful tools for variant annotation
Useful tools for the analysis of structural variation (SV) in the genome. Includes tools used for SV detection, annotation, and plotting resources.
A workflow for using SpeedSeq to align and call SVs from WGS data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.