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Name: YYXX
Type: User
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
An analysis of antibiotic resistance in the infant gut microbiome using genome-resolved metagenomics data.
Comprehensive resistance detection from WGS
Antibiotic Resistant Gene metagenomics and metatranscriptomics MAPping pipeline
病原微生物高通量测序数据分析笔记
Bayesian inference of ancestral dates on bacterial phylogenetic trees
A pipeline for performing genome-wide association tests for bacterial genomes.
Locus and lineage tests for bacterial GWAS
Fast genome-wide functional annotation through orthology assignment
Fast Whole-Genome Similarity (ANI) Estimation
Fast expectation maximization for microbial source tracking
A resistome profiler for Graphing Resistance Out Of meTagenomes
Data and code to accompany our paper on identifying patterns of gene degradation associated with invasiveness in Salmonella
A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome
Benchmarking of long-read assembly tools for bacterial whole genomes
Fast genome and metagenome distance estimation using MinHash
Analysing Metagenomic Species (MGS)
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
Interpretation and visualization of microbiome charts
An integrated pipeline for estimating strain-level genomic variation from metagenomic data
Scripts to download genomes from the NCBI FTP servers
New version
Phigaro is a scalable command-line tool for predictions phages and prophages from nucleid acid sequences (including metagenomes) and is based on phage genes HMMs and a smoothing window algorithm.
ResistoMap—online visualization of human gut microbiota antibiotic resistome
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
Pan-genome wide association studies
Metagenomic pipeline and other general scripts used in the lab.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.