Comments (3)
Yes I can add that.
Indeed, the progress bar is in bytes rather than in number of lines, as counting the number of lines requires to read the file (which becomes a bit redundant).
I'll add a message informing about the line number that raises an exception.
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latest commit (6c6257c) should be helpful for debugging your file
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Thank you!!
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Related Issues (20)
- Error when re-partitionning a .h5 file obtained from the panmodule subcommand HOT 1
- Extract gene IDs located within RGPs HOT 4
- Only extract gene families within RGPs HOT 5
- Attribute error when draw spots HOT 2
- Deprecated NumPy HOT 5
- Identity/coverage threshold for species/genus? HOT 1
- Spot Plot Error HOT 2
- PPanGGOLiN hangs when partitioning does not work HOT 11
- doubt about Circular contig identifiers HOT 4
- Non-deterministic clustering (possibly due to defragmentation) HOT 11
- Attribute error drawing plots HOT 1
- Discrepancy between # of genes in RGPs? HOT 1
- Rarefaction curves_No Heaps calculation HOT 5
- RGP drawn in spot figure is incorrect HOT 3
- Locus tag missing from projection file HOT 2
- Gbk files HOT 4
- ppanggolin draw --spots all don't create plots for all spots HOT 6
- Projection file returns spots for genes not in RGPs HOT 3
- Ignore genes during clustering HOT 2
- Comparing core genomes HOT 7
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