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awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

docker-osticket

Docker OSTicket image based on Alpine w/nginx, php-fpm, logrotate, cron, zabbix monitoring

drop

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

python-random-quote

A file-based quote bot written in Python

smallseq

Pipeline to analyze small RNAs from single-cells

spring

FASTQ compression

spring_fastq_archival

SPRING is a utility which compresses fastq files. This bash script recursively searches for fastq.gz files and compresses it to .spring file. Decompression script, which is to be ran at directory containing the spring file, extracts the fastq files back if required.

test_cs

website