Comments (3)
If you provide a PR, we are happy to merge it. Bonuspoints if you have a working test case :)
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Sorry to chip in. Originally, we designed the Prosit pipeline, so that it never changes any user input. We on purpose didn't skip sequences, because input and ouput files would have a different length. I believe that providing malformed input data should throw an error and not a warning. But maybe this premise changed in the Prosit pipeline.
@tkschmidt @LLautenbacher @fburic
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I see, that makes sense. If the premise hasn't changed, then I'd only suggest making the error more explicit. In my case, it took me quite some time to figure out what was wrong (and I'm familiar with Python). Then I just decided it was more efficient (and acceptable) for me to fix it like above :)
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Related Issues (20)
- TMT model files not compatible with Prost codes provided here
- dlib downloads on the website don't work - Error 500 HOT 1
- Python API to get MS2 predicted spectra HOT 2
- Is this project abandoned? No responses in issue tracker since 2020 and it's 2023 now. HOT 3
- Please make sure that your uploaded "msms.txt" is also named "msms.txt"
- This task ID is unkown. Please check if your task has another URL or re-submit your task. HOT 1
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