Comments (2)
tkschmidt
commented on August 27, 2024
probably my fault. The parser for generating the comments is using insufficient amount of characters to save the field. It will hopefully be fixed in the next release (coming soonTM). does it break some of your pipelines?
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gsaxena888
commented on August 27, 2024
I just ignored the "extra" parentheses, so it didn't break the pipeline (assuming ignoring is ok). Would this "next release" also include 1) the latest Prosit 2020 model or 2) the logic to support neutral loss fragments and support for modifications others than oxidation of methionine? (FYI: Currently, we're testing the code on a Google Cloud virtual machine with a single Nvidia GPU.)
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Related Issues (20)
- Prosit prediction is not deterministic on RTX3070 HOT 3
- Error occured. Status code: 2 HOT 6
- An error occurred. Status code 2 HOT 1
- intensities_raw in .hdf5 file is different from msms.txt in .zip file HOT 1
- Expected time for job completion on server, and related feature request HOT 5
- MSP files "Num peaks" always reporting 174 peaks HOT 4
- Missing predictions for some peptides under length 30
- Error code gotten in one of 20 parts HOT 1
- Please make sure that your uploaded "msms.txt" is also named "msms.txt" HOT 8
- How to run prosit locally in high performance computing environment? HOT 1
- Missing config.yml from Prosit-TMT model files HOT 6
- Error log which non-ncbi database
- Percolator subset-max-train Flag
- Error when running TMT models HOT 2
- Unable to download spectral library HOT 1
- Is there a way to run Prosit on Jupyter Notebook (Google Collab)?
- "Can't get the response from the server" HOT 1
- Prosit Download showing server issues HOT 3
- Prosit rescoring on own server HOT 1
- Error with spectral prediction HOT 1
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