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Athanasios Kousathanas's Projects

bayesc icon bayesc

Bayesian regression with spike and slab prior. Inference with Gibbs sampling.

bayesrrcmd icon bayesrrcmd

C++ implementation of BayesR using Eigen and memory map

edward-probability icon edward-probability

Probabilistic programming with Edward/Tensorflow. Applications include Bayesian Regression & Factor analysis.

gel-gwas icon gel-gwas

GWAS pipeline built for Genomics England using SAIGE

mofa icon mofa

Multi-Omics Factor Analysis

multidfe icon multidfe

Inference of the Distribution of Fitness effects of new mutations with Maximum Likelihood

popgen-rfuncs icon popgen-rfuncs

Functions to perform population genetic summary-statistics calculations in R

simsfs icon simsfs

Simulate site frequency spectra (SFS) under simple population genetic models

simsfs_fast icon simsfs_fast

Simulate site frequency spectra (SFS) under simple population genetic models using pre-computed allele frequency tables

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