Kay Oliver Schink's Projects
Open source code for AlphaFold.
Controlling a perfusion setup using an Arduino Uno and PyFirmata
A repository of my Coursera latex code and notes
A friendly, automated chi-square test function which takes care of post-hoc tests and multiple comparisons.
Colormap recommendation
ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
Code used in DAISY to correct astigmatism data using the SAF reference
The Leek group guide to data sharing
A Java library for scientific image computing
Automatically exported from code.google.com/p/iterative-fusion
Data analysis scripts for Tan et al, 2021
Native Implementation (CPU & GPU) of the Iterative Bayesian Deconvolution Algorithm in the Fiji Multi-View Deconvolution Plugin by Stephan Preibisch
Image analysis and post-processing scripts for the Nähse et al. DFCP1 paper
Accessory scripts for Deltavision OMX
Control and analysis code for OPM using Snouty objective
Software for Phafin2 manuscript
Webserver and command line tool for annotating engineered plasmids
Image analysis and post-processing scripts for Radulovic et al.
Image analysis and post-processing scripts for Sneeggen et al.
A script to measure distances of replication foci in E.coli using ImageJ and Python. For a more complete description, see Helgesen et al, 2015 (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4357733/)
A checklist to help you avoid all those minor errors when submitting a scientific manuscript
Fiji macro for cutting confocal stacks at various depths relative to surface signal