kauralasoo Goto Github PK
Name: Kaur Alasoo
Type: User
Company: University of Tartu
Twitter: kauralasoo
Location: Tartu, Estonia
Name: Kaur Alasoo
Type: User
Company: University of Tartu
Twitter: kauralasoo
Location: Tartu, Estonia
Reanalysis of the ATAC-Seq data from the Corces et al. 2016 paper
Analysis source code for co-expression trans-eQTL analysis
Helpful functions to streamline colocalisation analysis with coloc
An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants
Collection of reusable R functions for eQTL mapping
Analysis of macrophage cell surface expression of CD14, CD16 and CD206 proteins using flow cytometry.
Comprehensive pipeline for donor demultiplexing in single cell
This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
💎 🐳 A super customizable Jekyll theme for personal site, team site, blog, project, documentation, etc.
An example of a genomics analysis using knitr
Shared genetic effects on chromatin and gene expression reveal widespread enhancer priming in immune response
This repo is to merge genotype and phenotype daya of multiple datasets having common cell_types
Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads
Teaching materials and tutorials for the bioinformatics course thought at the University of Tartu
Tools to create PivotViewer collections in Python.
Robust Allele Specific Quantification and quality controL
R package to compare transcript annotations and split them into alternative transcription events.
Dynamic Documents for R
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Pipeline for downloading and processing published RNA-seq datasets
How random are Ryanair's randomly allocated seats really?
Semi-random collection of R functions to work with sequencing data.
Construct custom transcript annotations for Salmon
Small scripts and wrapper around tools to deal with genomics data.
A small R package to make sequencing read coverage plots in R.
A tool to create wiggle plots from RNA-Seq in R.
Toy example of optical character recognition implemented with OpenCV
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.