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Kai Li's Projects

diann icon diann

DIA-NN - a fast and easy to use tool for processing data-independent acquisition (DIA) proteomics data

flashlfq icon flashlfq

Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics

kd-tree icon kd-tree

KD-Tree Implementation in Java via http://www.cs.wlu.edu/~levy/software/kd/

metax icon metax

metaX: a flexible and comprehensive software for processing omics data.

msftbx icon msftbx

MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)

mzidlib icon mzidlib

MzidLib - A library of routines for manipulating data in the PSI's mzIdentML standard.

neoflow icon neoflow

NeoFlow is a standalone tool developed based on Nextflow and Docker and is developed for tumor neoantigens identification using DNA-Seq, RNA-Seq and MS/MS data.

pdv icon pdv

PDV: an integrative proteomics data viewer

proteoqc icon proteoqc

proteoQC: an R package for proteomics data quality assessment.

sayhello icon sayhello

A simple message board application build with Flask.

twelvemonkeys icon twelvemonkeys

TwelveMonkeys ImageIO: Additional plug-ins and extensions for Java's ImageIO

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