Comments (4)
ian-r-rose
commented on June 6, 2024
It should be installed to the same directory that is listed when you run jupyter lab path. If you are using conda I would expect it to already be in a user install. Is there a reason that you have specified /home/goerz/.conda/envs/default/bin/jupyter, rather than the one in your current environment?
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goerz
commented on June 6, 2024
Ah, yes, I just found jupyterlab/jupyterlab#4064 (comment) which provides the workaround.
Specifically, I had to do the following:
- Copy the contents of
/usr/local/anaconda/share/jupyter/lab/to~/.local/share/jupyter/lab/ - Add
export JUPYTERLAB_DIR=$HOME/.local/share/jupyter/labto my.bashrc
This got me at least a step further:
goerz@mlhpc2:~> jupyter labextension install jupyterlab-toc
> /usr/bin/npm pack jupyterlab-toc
jupyterlab-toc-0.2.1.tgz
> node /home/goerz/.conda/envs/default/lib/python3.6/site-packages/jupyterlab/staging/yarn.js install
yarn install v1.5.1
warning You are using Node "4.2.6" which is not supported and may encounter bugs or unexpected behavior. Yarn supports the following semver range: "^4.8.0 || ^5.7.0 || ^6.2.2 || >=8.0.0"
info No lockfile found.
[1/4] Resolving packages...
[2/4] Fetching packages...
error [email protected]: The engine "node" is incompatible with this module. Expected version ">= 4.8 < 5.0.0 || >= 5.10".
error An unexpected error occurred: "Found incompatible module".
info If you think this is a bug, please open a bug report with the information provided in "/home/goerz/.local/share/jupyter/lab/staging/yarn-error.log".
info Visit https://yarnpkg.com/en/docs/cli/install for documentation about this command.
> node /home/goerz/.conda/envs/default/lib/python3.6/site-packages/jupyterlab/staging/yarn.js run build:prod
yarn run v1.5.1
warning You are using Node "4.2.6" which is not supported and may encounter bugs or unexpected behavior. Yarn supports the following semver range: "^4.8.0 || ^5.7.0 || ^6.2.2 || >=8.0.0"
$ webpack --config webpack.prod.config.js
sh: 1: webpack: not found
error An unexpected error occurred: "Command failed.
Exit code: 127
Command: sh
Arguments: -c webpack --config webpack.prod.config.js
Directory: /home/goerz/.local/share/jupyter/lab/staging
Output:
".
info If you think this is a bug, please open a bug report with the information provided in "/home/goerz/.local/share/jupyter/lab/staging/yarn-error.log".
info Visit https://yarnpkg.com/en/docs/cli/run for documentation about this command.
Do you think the problem is simply the version of Node that the installation warns about? If so, I'll have to figure out how to update that...
/home/goerz/.conda/envs/default/bin/jupyter actually is the current jupyter, I just wrote out the full path to make sure it wouldn't get confused by the the "system" /usr/local/anaconda/bin/jupyter.
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ian-r-rose
commented on June 6, 2024
Yes, I expect that version of node to be a problem. I think you will want to install at least node v6.
It looks to me like your environment was getting confused about the different jupyters, since it was trying to install into the system one rather than your user one.
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goerz
commented on June 6, 2024
Ok, I think I got it working. Thanks!
Took me a while to find https://github.com/jupyterlab/jupyterlab/blob/master/CONTRIBUTING.md that points out you can install nodejs in your home directory via conda!
I'll close this issue for now, but it might be good to add a few lines to the README explaining some of these tricks. I imagine installing jupyter on a server without root access is somewhat common in the scientific computing space.
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Related Issues (20)
- Big wasted space HOT 2
- Falied to install jupterlab-toc HOT 2
- Allow heading numbering to start counting at later Headings and not just Heading 1 HOT 2
- Render cell doesn't show. Jupiter lab 2.2.6 HOT 1
- configuration option for font size HOT 1
- .py file navigation: remove method/class arguments
- Bring focus to
- Side bar is not showing up HOT 1
- An error occurred installing @jupyterlab/toc-extension. HOT 19
- Error while installing @jupyterlab/toc
- Mark this repo as archived HOT 10
- TOC eats up code cells HOT 1
- How to install if I cannot run "jupyter" HOT 4
- Indents for contents HOT 1
- The collapse ticker is missing in the table of contents HOT 1
- provide a new outline of folding , not adaptive but directly masking the titles when it is shrinked
- Keyboard shortcut to show sidebar panel? HOT 1
- An error occurred installing @jupyterlab/toc-extension. HOT 4
- No table of content in jupyter lab 3.0.7 HOT 4
- '@jupyterlab/toc' is not a valid extension HOT 2
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