Comments (23)
StefanKarpinski
commented on August 25, 2024
I added automatic building on Friday. There's no build command, largely because I'm not entirely sure how it should work. Should it recursively build all the dependencies of what you pass it? Should it be non-recursive by default? If you rm -rf ~/.julia/packages and do pkg> up then Pkg3 will reinstall and build all the packages.
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vdayanand
commented on August 25, 2024
Thanks, now Conda.jl is built successfully, but deps.jl is not generated for PyCall
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StefanKarpinski
commented on August 25, 2024
Can you try again? The PyCall problem was JuliaPy/Conda.jl#93 (worked around on the Pkg3 side).
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vdayanand
commented on August 25, 2024
Still unable to use PyCall
pkg> add PyCall
INFO: Cloning default registries into /home/osboxes/.julia/registries
INFO: [+] Uncurated = "https://github.com/JuliaRegistries/Uncurated.git"
INFO: Resolving package versions
INFO: Cloning [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] PyCall
INFO: Installing PyCall v1.15.0 [2ba54612238a85ee]
INFO: Cloning [1914dd2f-81c6-5fcd-8719-6d5c9610ff09] MacroTools
INFO: Installing MacroTools v0.3.7 [a9929c0284775cff]
INFO: Cloning [34da2185-b29b-5c13-b0c7-acf172513d20] Compat
INFO: Installing Compat v0.33.0 [f9f32f48f2137c42]
INFO: Cloning [30578b45-9adc-5946-b283-645ec420af67] URIParser
INFO: Installing URIParser v0.2.0 [3f29a4dd44e6efef]
INFO: Cloning [8f4d0f93-b110-5947-807f-2305c1781a2d] Conda
INFO: Installing Conda v0.7.0 [b26546424d5f3ac3]
INFO: Cloning [682c06a0-de6a-54ab-a142-c8b1cf79cde6] JSON
INFO: Installing JSON v0.15.1 [d1968e54b94ce404]
INFO: Cloning [ea8e919c-243c-51af-8825-aaa63cd721ce] SHA
INFO: Installing SHA v0.5.1 [91cc54078cfe2848]
INFO: Cloning [9e28174c-4ba2-5203-b857-d8d62c4213ee] BinDeps
INFO: Installing BinDeps v0.6.0 [28db737a557076fc]
INFO: Updating "~/.julia/environments/v0.6/Project.toml"
[438e738f] + PyCall v1.15.0
INFO: Updating "~/.julia/environments/v0.6/Manifest.toml"
[9e28174c] + BinDeps v0.6.0
[34da2185] + Compat v0.33.0
[8f4d0f93] + Conda v0.7.0
[682c06a0] + JSON v0.15.1
[1914dd2f] + MacroTools v0.3.7
[438e738f] + PyCall v1.15.0
[ea8e919c] + SHA v0.5.1
[30578b45] + URIParser v0.2.0
INFO: Building Conda [b26546424d5f3ac3]...
INFO: log: /home/osboxes/.julia/packages/N8e4/u0lj/deps/build.log
WARNING: Error building `Conda`; see log file for further info
INFO: Building PyCall [2ba54612238a85ee]...
INFO: log: /home/osboxes/.julia/packages/mbAM/vGCc/deps/build.log
WARNING: Error building `PyCall`; see log file for further info
julia> using PyCall
INFO: Recompiling stale cache file /home/osboxes/.juliapro-0.6.0.1/lib/v0.6/PyCall.ji for module PyCall.
ERROR: LoadError: ArgumentError: Module Pkg3 not found in current path.
Run `Pkg.add("Pkg3")` to install the Pkg3 package.
_require(::Symbol) at ./loading.jl:428
require(::Symbol) at ./loading.jl:398
include_from_node1(::String) at ./loading.jl:569
include(::String) at ./sysimg.jl:14
(::Base.Distributed.##135#136{Base.#include,Tuple{String},Array{Any,1}})() at ./distributed/remotecall.jl:314
run_work_thunk(::Base.Distributed.##135#136{Base.#include,Tuple{String},Array{Any,1}}, ::Bool) at ./distributed/process_messages.jl:56
#remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
#remotecall_fetch#144(::Array{Any,1}, ::Function, ::Function, ::Int64, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:367
remotecall_fetch(::Function, ::Int64, ::String, ::Vararg{Any,N} where N) at ./distributed/remotecall.jl:367
(::Base.##504#506{Base.JLOptions})() at ./task.jl:335
while loading /home/osboxes/Pkg3.jl/src/require.jl, in expression starting on line 1
#remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:340
remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
#remotecall_fetch#144(::Array{Any,1}, ::Function, ::Function, ::Int64, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:367
remotecall_fetch(::Function, ::Int64, ::String, ::Vararg{Any,N} where N) at ./distributed/remotecall.jl:367
(::Base.##504#506{Base.JLOptions})() at ./task.jl:335
Stacktrace:
[1] sync_end() at ./task.jl:287
[2] macro expansion at ./task.jl:303 [inlined]
[3] process_options(::Base.JLOptions) at ./client.jl:279
[4] _start() at ./client.jl:371
ERROR: Failed to precompile PyCall to /home/osboxes/.juliapro-0.6.0.1/lib/v0.6/PyCall.ji.
Stacktrace:
[1] compilecache(::String) at ./loading.jl:703
[2] _require(::Symbol) at ./loading.jl:456
[3] require(::Symbol) at ./loading.jl:398
julia> Pkg.add("Pkg3")
^X^C^C^C
^C^C^C^C^CWARNING: Force throwing a SIGINT
^C^C^C^CERROR: InterruptException:
Stacktrace:
[1] macro expansion at ./libgit2/error.jl:97 [inlined]
[2] #diff_tree#68(::Bool, ::Function, ::Base.LibGit2.GitRepo, ::Base.LibGit2.GitTree, ::String) at ./libgit2/diff.jl:22
[3] (::Base.LibGit2.#kw##diff_tree)(::Array{Any,1}, ::Base.LibGit2.#diff_tree, ::Base.LibGit2.GitRepo, ::Base.LibGit2.GitTree, ::String) at ./<missing>:0
[4] #isdiff#76(::Bool, ::Function, ::Base.LibGit2.GitRepo, ::String, ::String) at ./libgit2/libgit2.jl:149
[5] ^C(::SYSTEM: show(lasterr) caused an error
InterruptException()
Stacktrace:
[1] macro expansion at ./libgit2/error.jl:97 [inlined]
[2] #diff_tree#68(::Bool, ::Function, ::Base.LibGit2.GitRepo, ::Base.LibGit2.GitTree, ::String) at ./libgit2/diff.jl:22
[3] (::Base.LibGit2.#kw##diff_tree)(::Array{Any,1}, ::Base.LibGit2.#diff_tree, ::Base.LibGit2.GitRepo, ::Base.LibGit2.GitTree, ::String) at ./<missing>:0
[4] #isdiff#76(::Bool, ::Function, ::Base.LibGit2.GitRepo, ::String, ::String) at ./libgit2/libgit2.jl:149
[5] (::Base.Pkg.Entry.##2#4)(::Base.LibGit2.GitRepo) at ./pkg/entry.jl:59
[6] with(::Base.Pkg.Entry.##2#4, ::Base.LibGit2.GitRepo) at ./libgit2/types.jl:608
[7] macro expansion at ./pkg/entry.jl:57 [inlined]
[8] macro expansion at ./task.jl:302 [inlined]
[9] add(::String, ::Base.Pkg.Types.VersionSet) at ./pkg/entry.jl:51
[10] (::Base.Pkg.Dir.##3#6{Array{Any,1},Base.Pkg.Entry.#add,Tuple{String}})() at ./pkg/dir.jl:33
[11] cd(::Base.Pkg.Dir.##3#6{Array{Any,1},Base.Pkg.Entry.#add,Tuple{String}}, ::String) at ./file.jl:70
[12] withenv(::Base.Pkg.Dir.##2#5{Array{Any,1},Base.Pkg.Entry.#add,Tuple{String},String}, ::Pair{String,String}, ::Vararg{Pair{String,String},N} where N) at ./env.jl:157
[13] #cd#1(::Array{Any,1}, ::Function, ::Function, ::String, ::Vararg{String,N} where N) at ./pkg/dir.jl:32
[14] add(::String) at ./pkg/pkg.jl:117
[15] eval(::Module, ::Any) at ./boot.jl:235
[16] eval_user_input(::Any, ::Base.REPL.REPLBackend) at ./REPL.jl:66
[17] macro expansion at ./REPL.jl:97 [inlined]
[18] (::Base.REPL.##1#2{Base.REPL.REPLBackend})() at ./event.jl:73
julia> exit
exit (generic function with 2 methods)
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StefanKarpinski
commented on August 25, 2024
@vdayanand, what's in the build logs?
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vdayanand
commented on August 25, 2024
Here is the build.log of PyCall
ERROR: LoadError: ArgumentError: Module Pkg3 not found in current path.
Run `Pkg.add("Pkg3")` to install the Pkg3 package.
_require(::Symbol) at ./loading.jl:428
require(::Symbol) at ./loading.jl:398
include_from_node1(::String) at ./loading.jl:569
include(::String) at ./sysimg.jl:14
(::Base.Distributed.##135#136{Base.#include,Tuple{String},Array{Any,1}})() at ./distributed/remotecall.jl:314
run_work_thunk(::Base.Distributed.##135#136{Base.#include,Tuple{String},Array{Any,1}}, ::Bool) at ./distributed/process_messages.jl:56
#remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
#remotecall_fetch#144(::Array{Any,1}, ::Function, ::Function, ::Int64, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:367
remotecall_fetch(::Function, ::Int64, ::String, ::Vararg{Any,N} where N) at ./distributed/remotecall.jl:367
(::Base.##504#506{Base.JLOptions})() at ./task.jl:335
while loading /home/osboxes/Pkg3.jl/src/require.jl, in expression starting on line 1
#remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:340
remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
#remotecall_fetch#144(::Array{Any,1}, ::Function, ::Function, ::Int64, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:367
remotecall_fetch(::Function, ::Int64, ::String, ::Vararg{Any,N} where N) at ./distributed/remotecall.jl:367
(::Base.##504#506{Base.JLOptions})() at ./task.jl:335
Stacktrace:
[1] sync_end() at ./task.jl:287
[2] macro expansion at ./task.jl:303 [inlined]
[3] process_options(::Base.JLOptions) at ./client.jl:279
[4] _start() at ./client.jl:371
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StefanKarpinski
commented on August 25, 2024
That's very strange.
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vdayanand
commented on August 25, 2024
Sorry. above log is of Conda not PyCall. BTW what is the new naming convention of the packages dir?
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StefanKarpinski
commented on August 25, 2024
It's a 4-char ASCII "slug" based on the package UUID and a 4-char ASCII slug based on the source tree hash. Code is here:
https://github.com/StefanKarpinski/Pkg3.jl/blob/d6aef97c7396e093f30a59d2584a04330d764c1e/src/Operations.jl#L10-L39
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StefanKarpinski
commented on August 25, 2024
What's in your LOAD_PATH?
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vdayanand
commented on August 25, 2024
"/home/osboxes/JuliaPro/JuliaPro-0.6.0.1/Julia/local/share/julia/site/v0.6"
"/home/osboxes/JuliaPro/JuliaPro-0.6.0.1/Julia/share/julia/site/v0.6"
"/root/.juliapro-0.6.0.1/v0.6"
from pkg.jl.
StefanKarpinski
commented on August 25, 2024
It seems like Pkg3 is installed at /home/osboxes/Pkg3.jl, which isn't in your LOAD_PATH. How are you loading Pkg3?
from pkg.jl.
vdayanand
commented on August 25, 2024
include("/home/osboxes/Pkg3.jl/src/Pkg3.jl")
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StefanKarpinski
commented on August 25, 2024
It needs to be in your LOAD_PATH – I guess I could automatically add it.
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StefanKarpinski
commented on August 25, 2024
After f6d6de5 this should work even if you load Pkg3 via include and it's not on your LOAD_PATH.
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vdayanand
commented on August 25, 2024
LOAD_PATH
1-element Array{Any,1}:
"/home/osboxes/Pkg3.jl"
ICU build log:
ERROR: LoadError: ArgumentError: Module Pkg3 not found in current path.
Run `Pkg.add("Pkg3")` to install the Pkg3 package.
_require(::Symbol) at ./loading.jl:428
require(::Symbol) at ./loading.jl:398
include_from_node1(::String) at ./loading.jl:569
include(::String) at ./sysimg.jl:14
(::Base.Distributed.##135#136{Base.#include,Tuple{String},Array{Any,1}})() at ./distributed/remotecall.jl:314
run_work_thunk(::Base.Distributed.##135#136{Base.#include,Tuple{String},Array{Any,1}}, ::Bool) at ./distributed/process_messages.jl:56
#remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
#remotecall_fetch#144(::Array{Any,1}, ::Function, ::Function, ::Int64, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:367
remotecall_fetch(::Function, ::Int64, ::String, ::Vararg{Any,N} where N) at ./distributed/remotecall.jl:367
(::Base.##504#506{Base.JLOptions})() at ./task.jl:335
while loading /home/osboxes/Pkg3.jl/src/require.jl, in expression starting on line 1
#remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:340
remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:339
#remotecall_fetch#144(::Array{Any,1}, ::Function, ::Function, ::Int64, ::String, ::Vararg{String,N} where N) at ./distributed/remotecall.jl:367
remotecall_fetch(::Function, ::Int64, ::String, ::Vararg{Any,N} where N) at ./distributed/remotecall.jl:367
(::Base.##504#506{Base.JLOptions})() at ./task.jl:335
Stacktrace:
[1] sync_end() at ./task.jl:287
[2] macro expansion at ./task.jl:303 [inlined]
[3] process_options(::Base.JLOptions) at ./client.jl:279
[4] _start() at ./client.jl:371
from pkg.jl.
StefanKarpinski
commented on August 25, 2024
You need the directory that Pkg3.jl is in in your LOAD_PATH, not its path, so /home/osboxes. Did updating to the more recent version allow it to work with include? I tested locally and it worked.
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vdayanand
commented on August 25, 2024
Yes I am using the latest version.
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vdayanand
commented on August 25, 2024
Now I updated it to /home/osboxes, still same problem
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StefanKarpinski
commented on August 25, 2024
Is this running in -p mode on multiple computers?
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vdayanand
commented on August 25, 2024
--compilecache=no is the only argument.
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vdayanand
commented on August 25, 2024
works now with the new fix.
Thanks
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StefanKarpinski
commented on August 25, 2024
w00t!
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Related Issues (20)
- restrict package by version HOT 2
- Feature request (with code!): Search for registered packages + display releases HOT 1
- Feature request: `]test --quiet` (don't always dump the whole manifest on `Pkg.test()`) HOT 3
- New HistoricalStdlibVersions version is breaking the Pkg tests HOT 1
- very unsound assumptions about REPL state injection HOT 5
- nested task error: ArgumentError: Number of elements must be nonnegative HOT 1
- Docstring for `Registry`
- Bad resolution for SHA in manager
- Improvements to registry status outputs HOT 1
- Pkg tests puts an outdated copy of `General` in `usr/share/registries`
- Dont overload `zero` for `VersionWeight`
- Hide unnecessary internal Pkg stack traces in test logs HOT 2
- `status` can error when the RHS in `[extensions]` does not map to a weak dep HOT 1
- Document two new ways of specifying test-specific dependencies
- Weird syntax highlighting in docstrings HOT 3
- `Suggestions` when doing `up` show when there are none on v1.11
- Manifest usage log error should be non-fatal
- Add back support for full VersionNumbers to the resolver
- Pkg CI does a lot of re-precompiling stdlibs HOT 2
- Pkg.jl needs compat bounds on julia
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