joshcullen Goto Github PK

acceleration

R code associated w/ Cullen et al paper on the estimation of behavioral states and habitat associations in giant armadillos using acceleration and GPS data

activcenter_subset_locations

activity_center1

bayes_ssf

bayesmove

Non-Parametric Bayesian Analyses of Animal Movement

bayesmove_method_comparison

R code associated with Cullen et al. paper proposing non-parametric Bayesian framework to estimate animal behavior from biologging data

bayesmove_shiny_demo

Materials for presentation showing how to explore animal movement data with the {bayesmove} Shiny app

behavior_and_spaceuse_workshop

R code and materials used for presenting workshop on conducting common analyses in animal movement ecology.

cluster_tsegments_behavior

cluster_tsegments_loc

fdn_cmydas_behavior_space-use

A set of code originally used as part of a workshop on estimating behavioral states and space-use from animal telemetry data. This project aims to estimate latent behavioral states and space-use of breeding adult males tagged at Fernando de Noronha, Brazil.

fl_water_data

Extract and analyze the Global Surface Water data downloaded off Google Earth Engine

fpincidence

Assess spatiotemporal patterns of FP incidence in green turtles

git_lda_behavior

git_segmentation_behavior

git_segmentation_model

git_ssf

hmm_armadillo

invasive_spp_expert_elicitation

Code used to build website for Invasive Species Expert Elicitation Workshop (April 27-28, 2022)

invasive_spp_shiny

Code used to develop a Shiny app that can be used as part of an expert elicitation workshop on invasive species in the Southeastern US

joshcullen.github.io

method-comparison

Compare our method against common methods for space and behavior identification on simulated and empirical data

mixture_movem

multi_spp_overlap

ne_fw_conf_shiny_workshop

Workshop materials for teaching R Shiny at the 2022 Northeast Fish & Wildlife Conference (Long Branch, NJ)

personal_website

Source code for my website

personal_website2

personal_website3

New website using Quarto

plotting_movement_tracks

Different methods for visualizing animal movement

process_imputation

Perform process imputation on irregular animal telemetry time series for further analyses