jonmarty Goto Github PK

ansible-role-apache-cas

Works on top of geerlingguy/ansible-role-apache. Installs apereo/mod_auth_cas and configures a selected apache directory to use CAS authentication.

circuitvisual

Visual of a circuit board, using p5.js.

creature-simulation

A Evolutionary Simulator consisting of creatures on a grid (Plants, Herbivores, Carnivores)

cv-documents

Curriculum Vitae and Related Documents

deepops-fbl-ood

embeddedapplication

Allows the user to embed any number of processing applications inside of a drawing board.

ffbo.neuroarch_component

ffbo.neurokernel_component

ffbo.nlp_component

ffbo.processor

flybrainlab

An interactive computing platform for studying the function of executable circuits constructed from fly brain data.

flybrainlab-ood

hankquinlan.github.io

This is a demo GitHub Pages and Jekyll site. See README for more info.

hemimap

how_to_make_an_evolutionary_tetris_bot

This is the code for the "How to Make an Evolutionary Tetris Bot" by Siraj Raval on Youtube

jonmarty.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

lsystem

Simple educational interface for creating complex shapes represented using Lindenmayer Systems.

metropolis

Visual of the metropolis algorithm, highlighting different substeps of the sampling algorithm, including selection of a particle, sampling from a proposal distribution to determine candidate next state, evaluation of candidate state based on the Boltzmann factor, relative to the Boltzmann factor of the current state, and movement of particle.

morris-lecar

An implementation of the Morris-Lecar Neuron from Theoretical Neuroscience

nat

NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

neuprint

tools for importing connectome data into neo4j

neurodriver

LPU class with support for various neuron and synapse models

neurokernel

Neurokernel Project

neurovisual

Uses g9 to create an interactive visual of the function of a neuron receiving inputs from external stimuli and ion channels, causing it to spike.

pingpong

A game where two IPs act like "players" in a game. The players ping each others' ports until they do not recieve a response. This gives the pinging player a point. Games are played to a certain number of plays. Higher score wins.

pub_docs

pycuda-kmeans

A parallelized PyCuda implementation of the KMeans clustering algorithm.

pymsf

Efficient routines to compute Master Stability Function

roman-coin-image-search

Images were extracted from coinshome.net. Implements an autoencoder to squash down images into arrays of length 20 to make them easier to search.

sa-travelingsalesman

Utilization of simulated annealing to approximate the traveling salesman problem. Simulated annealing is an optimization technique that is a variant of the metropolis algorithm were temperature is treated as a variable, decreasing over time. This decrease in temperature increases the penalty for increasing the energy of a given state, making the algorithm less likely to move to a less probable state, and therefore more likely to range towards minima. When combined with MCMC's ability to explore the high probability regions of a given space, this allows the algorithm to shift from exploration to exploitation during operation.