joe311 Goto Github PK
Name: Joe
Type: User
Company: Max Planck Institute of Neurobiology
Joe's Projects
byb_2019
caiman
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
cell_gui
A graphical user interface for annotating cells in 3d.
course-content-dl
cshl2019
cshl2023_projector_camera_maping
dm_control
eye_tracker
Old eye tracking code for code review
fishexplorer
interactive analysis of calcium imaging data from larval zebrafish
greedypy
Greedy weak diffeomorphic image registration in Python
holo_project
Code for holographic optogenetic control of neuron activity - accompanying the paper Dal Maschio, Donovan et. al.
imaging_data_sim
Straightforward vectorized simulation of calcium imaging data
lightsheet_control
linear_algebra_workshop
Lisbon 2022
matplotlib
matplotlib: plotting with Python
matrix_reordering
optical_threads_for_cad
Adds common optical threads to Fusion360
pydata-talk_multidim-data-analysis
Joe's talk on multidimensional analysis from Munich Pydata 2018_07_11- https://www.meetup.com/PyData-Munchen/events/252446956/
superpythontalks-daskpipelines
Super Python Talks for Life Sciences - Python pipelines for data analysis
vispy
Main repository for Vispy
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