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algorithmsinbioinformatics

Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python

auto-mulled

Generating Docker containers from bioconda on the fly with Travis cron-job feature.

backup-bash

Real time file syncing daemon using Rsync and Inotify written in Bash

bioconda-recipes

Conda recipes for the bioconda channel.

chi-c-notebook

chicago

Fork of the CHiCAGO package from Babraham Institute, Cambridge hosted on bitbucket

conda-recipes

build and test recipes for conda

cooler

A cool place to store your Hi-C

cooler-binder

Cooler demo using a Jupyter notebook Binder

dnn-pcc

docker-galaxy-epigenetics

:whale::bar_chart::books: Docker Images for epigenetics data analysis

epinano

Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads

fit_nbinom

Negative binomial maximum likelihood estimate implementation in Python

fontconfig-feedstock

A conda-smithy repository for fontconfig.

galaxy

Data intensive science for everyone.

galaxyhowto

First steps to configure a vanilla galaxy instance

galaxytools

:microscope::books: Galaxy Tool wrappers

glmol

A molecular viewer written in Javascript and WebGL

hicexplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

knight-ruiz-matrix-balancing-algorithm

machine_learning_101

Machine learning

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc_testdata

Test data for MultiQC. See https://github.com/ewels/MultiQC

parallel-fastq-dump

parallel fastq-dump wrapper

rbc_docs

RBC de.NBI documents

rna-seq-star-deseq2

RNA-seq workflow using STAR and DESeq2

schicexplorer

Single-cell Hi-C data analysis toolbox

scripts

sparse-neighbors-search

A python/c++ implementation of an approximate nearest neighbor search for sparse data structures based on the idea of local sensitiv hashfunctions.

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks