Comments (1)
In the Seurat demo they use:
We filter out cells that have unique gene counts over 2,500 or less than 200 Note that low.thresholds and high.thresholds are used to define a 'gate' -Inf and Inf should be used if you don't want a lower or upper threshold.
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Related Issues (20)
- Differential expression among gemline cell types
- Stacked barplot percent FBgn with DEG by chrom arm HOT 1
- Part 4: Gene movement HOT 1
- Bulk RNA-Seq table HOT 1
- Wiggle Track, example of intronless genes
- Move expression atlas
- Calculate Tau
- Housekeeping TSPS
- Adult male biased gene expression
- Pull out non sex biased genes
- Testis biased expression and ribosomal genes
- Bulk demasculinization plots
- Determine how many genes have moved from X.
- Is there demasculinization of somatic male biased expressed genes
- PS-biased X-linked genes
- Generalized chromosome location plot
- Part 2: MSCI
- Re-color UMAPs
- Change zoom back to z-score
- Re-label X/A.
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