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antlr-mega-tutorial

This is the companion repository of the ANTLR Mega Tutorial, that will explain everything you need to know to use ANTLR.

bioconda-recipes

Conda recipes for the bioconda channel.

calc-test

caps-sa

Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays

caring-for-your-cache-with-amqs

Implementation of a basic Bloom filter and of a blocked Bloom filter.

cmake-playground

Playing around with and getting to know CMake.

cpp-custom-container-playground

Playing around with C++ custom containers and iterators designing.

cse-519-public-notice-analysis

distributed-memory-matrix-multiplication

ffpw

Fastest FastX Parser in the West

formal-verification-of-bubble-sort

Formal Verification of the Correctness of a Bubble Sort Implementation Using Coq

gfa-spec

Graphical Fragment Assembly (GFA) Format Specification

handwritten-digit-classifier

A simple classifier for recognizing handwritten characters from image data, implementing the naive Bayes and the k-nearest neighbor classifications.

huffman-compressor

A lossless data compressor using the Huffman Coding.

implementation-of-some-succint-primitives

Implementation of: an efficient basic bitvector library with constant-time set and get words; a succint, constant-time bit-vector rank-support data structure; a succint, logarithmic-time bit-vector select-support data structure; and wavelet tree construction on arbitrary texts, with serialization, access, rank, and select query support.

k-mer

An attempt on designing an arbitrary length k-mer class; and to generate the codes of the classes for all k-values at compile-time using template metaprogramming.

key-value-collator

Collate collections of key-value pairs, deposited from multiple producers; and iterate over the collated collection.

kmc

Fast and frugal disk based k-mer counter

kmerestimate_project

A project submitted as the requirement of the course CSE 549 (Computational Biology), titled as "Efficient Parallelization for KmerEstimate: A Streaming Algorithm for Estimating k-mer Counts with Optimal Space Usage". Original serial algorithm available at github.com/srbehera11/KmerEstimate.

parallel-minimum-spanning-forest

ray-tracer

An implementation of the ray tracing technique to render images of basic geometric shapes with simple simulation of various concepts (reflection, refraction, scattering etc.) from Physics.

test-project

the-unix-workbench

:house_with_garden: A Book for Anyone to Get Started with Unix

the-unix-workbench-project

Peer-graded Assignment: Bash, Make, Git, and GitHub

voronoi-diagram-generator

A Voronoi diagram generator for any given set of points in the Euclidean plane using an incremental computation of the corresponding Delaunay triangulation.