Code Monkey home page Code Monkey logo

isugifnf's Projects

assemblystats icon assemblystats

Run Assembly statistics on a genome assembly (BUSCO and assemblyStats and new_Assemblathon.pl)

blast icon blast

NextFlow implementation of BLAST program

gatk-flow icon gatk-flow

Nextflow implementation of the GATK HaplotypeCaller pipeline

nanopolish icon nanopolish

Polish a nanopore assembly using Racon and Medaka

nanoqctrim icon nanoqctrim

Performs Nanoplot QC using nanoplot and adaptor trimming using downpore

polishclr icon polishclr

A nextflow pipeline for polishing CLR assemblies

rnaseq icon rnaseq

RNAseq from fastq reads to gene counts/quantification

tutorial icon tutorial

Tutorial on how to use nextflow to create a workflow for blast

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.