iobio Goto Github PK

aws-side-quest

backend-overhaul-notes

bam.iobio.io

http://bam.iobio.io

bigwig-depther-rs

calypso_pipeline

clin.iobio

Clin.iobio - Workflow and reporting for iobio variant analysis pipeline

cohort-gene

developer.iobio

dev kit website

diff-express.viz

An application for genetic differential expression dataset visualization.

example-bamviewer

(NO LONGER SUPPORTED) Simple example to make your first web app with iobio

example-queue

example app to show how to interact with the queue

files.iobio

Thin layer to allow users to upload their local files to s3 and pop them into iobio apps easily

fq2fa

Fastq to fasta converter, both single ended and pair ended reads are supported.

gene.iobio

Gene.iobio vue

gene.model.db

Import refseq gene model (gff3) to sqlite3 db for gene.iobio and update with xref and canonical infor for transcripts

gene_phenotype_associations

Python scripts to load gene-to-phenotype db to supply gene to HPO terms (phenotypes) and gene to disease assocations.

geneinfo.db

This is project for rebuilding gene model by python

genepanel-2

genepanel.iobio

Genepanel.iobio: generate list of genes based on suspected conditions and phenotypes.

gru-aws-volume-manager

homepage

iobio-api-client

iobio-backend-services

iobio-backend-tester

iobio-galaxy.bam_iobio_io

The docker container that is created for embedding bam.iobio inside Galaxy

iobio-galaxy.vcf_iobio_io

The docker container that is created for embedding vcf.iobio inside Galaxy

iobio-gru-backend

iobio-gru-backend-go

iobio-launch

Frontend library for managing things like the backend whitelist.

iobio-log-server