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dlegland avatar dlegland commented on June 22, 2024 1

You can try new snapshot version:
https://github.com/ijpb/MorphoLibJ/releases/tag/v1.4.3-test

I tried with a 2D tiff image, and got not problem...

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tischi avatar tischi commented on June 22, 2024 1

Thanks! I trust you :)

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dlegland avatar dlegland commented on June 22, 2024

Hi,
yes maybe.
The default behaviour in most MLJ plugins is to use the "short name" of the images, and to add a suffix like "-crop", "-filter"...

maybe a rename command in the beginning of the macro could solve the pbm?

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tischi avatar tischi commented on June 22, 2024

maybe a rename command in the beginning of the macro could solve the pbm?

Yes, it does. Not sure whether this is good though. I think beginners would have zero chance of figuring this out.

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dlegland avatar dlegland commented on June 22, 2024

Hmm, not clear to me... When a new image is created, a new name is generated. So the problem is to get image name from the input image name and assuming the processing within plugin, right? The processing will always being plugin-dependent IMHO...

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tischi avatar tischi commented on June 22, 2024

I am fetching the name of the current image, using getTitle():

input = getTitle();
run("Intensity Measurements 2D/3D", "input=["+input+"] labels=mask mean numberofvoxels");

But if input.contains(".tif") it crashes.

image

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dlegland avatar dlegland commented on June 22, 2024

OK, so it seems this is a bug....
I try to have a look. I also cc @iarganda , I think he wrote the plugin originally

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dlegland avatar dlegland commented on June 22, 2024

well, I think I found!
just need to recompile (i.e., fighting with maven), to get a new version...

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