idworkin Goto Github PK

2015-angus-paper

atm_sociabilitygenomicsoutputs

This is a temporary copy of the output tables from ATM analysis from the sociability strains

bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

chandlerchariplosgenetics2017

covariance-reaction-norms

Code, tutorial, and data files for estimating covariance reaction norm (CRN) models

cricket-wings

Scripts and data for the analyses from Pitchers et al. 2014 "The potential influence of morphology on the evolutionary divergence of an acoustic signal."

drosophila_phylogeny

Pipeline overview and code (including BLT-DCT program) for widespread introgression across a phylogeny of 155 Drosophila genomes

edda

ethograms

This is for projects in progress

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

grant_proposal

Some Useful files I have generated while figuring out how to write proposals

knitr

A general-purpose tool for dynamic report generation in R

labs

Rmd source files for the HarvardX series PH525x

mcmasterdatalunch

Just a place to put links to papers and libraries that we discuss in DataLunch

ml-examples

Machine Learning examples, mostly in R

motion_tracking

An example of using OpenCV with Python to track motion in real time

mpcmarchive

Archive of Online Practical Materials for the book of Modern Phylogenetic Comparative Methods (ed. Garamszegi, 2014)

mr-pmm

Tutorial materials covering model specification, diagnostics, validation, inference and simulation for multi-response phylogenetic mixed models in R.

oneliners

Useful bash one-liners for bioinformatics.

r_scripts

Scripts I generate for R for my thesis

radishevolution

Just a placeholder for some markdown documents

read-cleaning-format-conversion

Short scripts to convert or modify Bioinformatics files

regexcite

This Does Little

seminarseriesmcmaster

Just information for the seminar series at McMaster for Biology

swirl

Statistics with Interactive R Learning

teaching_myself_stan

Just getting used to stan, and how it works.

testanick.github.io

Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll

tools4rr

Materials for a one-credit course on reproducible research

turnerkernforaging

wilson2021_evolution_data

Data and scripts associated with Wilson, Siddiqui and Dworkin 2021 (Evolution)